Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl1P10146 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl1P10146 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl1P10146 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl1P10146 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl1P10146 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl1P10146 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl1P10146 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl1P10146 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl1P10146 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl1P10146 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl1P10146 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl1P10146 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccl1P10146 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl1P10146 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl1P10146 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl1P10146 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.31■□□□□ 0.36
Ccl1P10146 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl1P10146 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl1P10146 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl1P10146 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.31■□□□□ 0.36
Ccl1P10146 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl1P10146 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl1P10146 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl1P10146 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl1P10146 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl1P10146 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccl1P10146 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl1P10146 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl1P10146 Gm30023-201ENSMUST00000197970 889 ntBASIC17.3■□□□□ 0.36
Ccl1P10146 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl1P10146 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl1P10146 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl1P10146 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccl1P10146 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl1P10146 Gm24804-201ENSMUST00000174982 85 ntBASIC17.29■□□□□ 0.36
Ccl1P10146 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl1P10146 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl1P10146 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl1P10146 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccl1P10146 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl1P10146 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccl1P10146 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccl1P10146 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccl1P10146 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccl1P10146 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl1P10146 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccl1P10146 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl1P10146 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl1P10146 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.27■□□□□ 0.36
Ccl1P10146 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl1P10146 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccl1P10146 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccl1P10146 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl1P10146 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Ccl1P10146 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl1P10146 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.26■□□□□ 0.35
Ccl1P10146 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccl1P10146 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl1P10146 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl1P10146 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl1P10146 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl1P10146 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl1P10146 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccl1P10146 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.25■□□□□ 0.35
Ccl1P10146 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl1P10146 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl1P10146 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl1P10146 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl1P10146 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccl1P10146 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl1P10146 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl1P10146 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl1P10146 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccl1P10146 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl1P10146 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Ccl1P10146 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl1P10146 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl1P10146 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccl1P10146 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl1P10146 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.22■□□□□ 0.35
Ccl1P10146 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl1P10146 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl1P10146 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccl1P10146 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccl1P10146 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccl1P10146 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccl1P10146 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl1P10146 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl1P10146 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccl1P10146 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl1P10146 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl1P10146 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl1P10146 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccl1P10146 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccl1P10146 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl1P10146 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl1P10146 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccl1P10146 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.18■□□□□ 0.34
Ccl1P10146 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms