Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa6P09092 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa6P09092 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa6P09092 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa6P09092 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa6P09092 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa6P09092 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa6P09092 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hoxa6P09092 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa6P09092 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hoxa6P09092 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa6P09092 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa6P09092 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa6P09092 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa6P09092 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hoxa6P09092 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.12■□□□□ 0.65
Hoxa6P09092 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa6P09092 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa6P09092 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa6P09092 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.11■□□□□ 0.65
Hoxa6P09092 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.1■□□□□ 0.65
Hoxa6P09092 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa6P09092 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Hoxa6P09092 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxa6P09092 Gm5812-201ENSMUST00000061073 957 ntBASIC19.09■□□□□ 0.65
Hoxa6P09092 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxa6P09092 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxa6P09092 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Hoxa6P09092 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxa6P09092 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.08■□□□□ 0.64
Hoxa6P09092 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxa6P09092 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.07■□□□□ 0.64
Hoxa6P09092 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa6P09092 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa6P09092 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa6P09092 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa6P09092 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.07■□□□□ 0.64
Hoxa6P09092 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.07■□□□□ 0.64
Hoxa6P09092 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa6P09092 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxa6P09092 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxa6P09092 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxa6P09092 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxa6P09092 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.06■□□□□ 0.64
Hoxa6P09092 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxa6P09092 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa6P09092 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hoxa6P09092 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa6P09092 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa6P09092 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Hoxa6P09092 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hoxa6P09092 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.04■□□□□ 0.64
Hoxa6P09092 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hoxa6P09092 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa6P09092 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hoxa6P09092 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hoxa6P09092 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa6P09092 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Hoxa6P09092 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.03■□□□□ 0.64
Hoxa6P09092 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Hoxa6P09092 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa6P09092 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.03■□□□□ 0.64
Hoxa6P09092 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hoxa6P09092 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa6P09092 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Hoxa6P09092 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Hoxa6P09092 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa6P09092 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa6P09092 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
Hoxa6P09092 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Hoxa6P09092 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.02■□□□□ 0.63
Hoxa6P09092 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxa6P09092 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxa6P09092 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Hoxa6P09092 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hoxa6P09092 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.01■□□□□ 0.63
Hoxa6P09092 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.01■□□□□ 0.63
Hoxa6P09092 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hoxa6P09092 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa6P09092 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa6P09092 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19■□□□□ 0.63
Hoxa6P09092 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms