Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P06328 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
P06328 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06328 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06328 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P06328 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.28■□□□□ 0.2
P06328 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06328 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P06328 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06328 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06328 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06328 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P06328 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.27■□□□□ 0.2
P06328 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06328 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06328 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06328 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
P06328 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P06328 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P06328 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
P06328 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P06328 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P06328 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
P06328 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.26■□□□□ 0.19
P06328 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.26■□□□□ 0.19
P06328 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.26■□□□□ 0.19
P06328 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
P06328 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
P06328 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06328 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.24■□□□□ 0.19
P06328 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
P06328 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06328 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06328 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06328 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.24■□□□□ 0.19
P06328 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.24■□□□□ 0.19
P06328 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.24■□□□□ 0.19
P06328 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P06328 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P06328 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P06328 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P06328 Gm4799-201ENSMUST00000095396 657 ntBASIC16.23■□□□□ 0.19
P06328 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.23■□□□□ 0.19
P06328 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P06328 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P06328 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
P06328 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.22■□□□□ 0.19
P06328 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
P06328 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.21■□□□□ 0.19
P06328 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
P06328 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.21■□□□□ 0.19
P06328 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P06328 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
P06328 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P06328 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P06328 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
P06328 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P06328 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.2■□□□□ 0.18
P06328 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P06328 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.2■□□□□ 0.18
P06328 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
P06328 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P06328 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P06328 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.19■□□□□ 0.18
P06328 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P06328 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P06328 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.19■□□□□ 0.18
P06328 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
P06328 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P06328 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.18■□□□□ 0.18
P06328 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06328 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06328 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06328 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms