Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P06328 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
P06328 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06328 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06328 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P06328 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.28■□□□□ 0.2
P06328 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06328 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P06328 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06328 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06328 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06328 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P06328 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.27■□□□□ 0.2
P06328 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06328 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06328 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06328 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
P06328 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P06328 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P06328 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
P06328 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P06328 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P06328 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
P06328 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.26■□□□□ 0.19
P06328 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.26■□□□□ 0.19
P06328 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.26■□□□□ 0.19
P06328 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06328 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
P06328 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
P06328 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P06328 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06328 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.24■□□□□ 0.19
P06328 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
P06328 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06328 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06328 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06328 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.24■□□□□ 0.19
P06328 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.24■□□□□ 0.19
P06328 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.24■□□□□ 0.19
P06328 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P06328 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P06328 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P06328 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P06328 Gm4799-201ENSMUST00000095396 657 ntBASIC16.23■□□□□ 0.19
P06328 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.23■□□□□ 0.19
P06328 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P06328 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P06328 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
P06328 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P06328 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.22■□□□□ 0.19
P06328 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
P06328 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.21■□□□□ 0.19
P06328 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
P06328 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.21■□□□□ 0.19
P06328 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P06328 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
P06328 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P06328 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P06328 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
P06328 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P06328 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.2■□□□□ 0.18
P06328 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P06328 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.2■□□□□ 0.18
P06328 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
P06328 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P06328 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P06328 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.19■□□□□ 0.18
P06328 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P06328 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P06328 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.19■□□□□ 0.18
P06328 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
P06328 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P06328 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.18■□□□□ 0.18
P06328 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P06328 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06328 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06328 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06328 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms