Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcn1O88704 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Hcn1O88704 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.2■□□□□ 0.98
Hcn1O88704 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Hcn1O88704 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcn1O88704 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.2■□□□□ 0.98
Hcn1O88704 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hcn1O88704 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hcn1O88704 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hcn1O88704 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hcn1O88704 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hcn1O88704 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hcn1O88704 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hcn1O88704 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hcn1O88704 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hcn1O88704 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hcn1O88704 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Hcn1O88704 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn1O88704 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn1O88704 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.16■□□□□ 0.98
Hcn1O88704 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn1O88704 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
Hcn1O88704 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn1O88704 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Hcn1O88704 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn1O88704 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hcn1O88704 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hcn1O88704 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
Hcn1O88704 Gm9812-201ENSMUST00000061934 968 ntBASIC21.15■□□□□ 0.98
Hcn1O88704 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hcn1O88704 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Hcn1O88704 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Hcn1O88704 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Hcn1O88704 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hcn1O88704 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hcn1O88704 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hcn1O88704 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn1O88704 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn1O88704 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn1O88704 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.13■□□□□ 0.97
Hcn1O88704 Scarna2-201ENSMUST00000157560 414 ntBASIC21.13■□□□□ 0.97
Hcn1O88704 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn1O88704 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn1O88704 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.13■□□□□ 0.97
Hcn1O88704 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn1O88704 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.12■□□□□ 0.97
Hcn1O88704 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hcn1O88704 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hcn1O88704 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hcn1O88704 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hcn1O88704 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hcn1O88704 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hcn1O88704 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Hcn1O88704 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hcn1O88704 Mir6538-201ENSMUST00000183713 110 ntBASIC21.11■□□□□ 0.97
Hcn1O88704 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.11■□□□□ 0.97
Hcn1O88704 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hcn1O88704 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Hcn1O88704 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hcn1O88704 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hcn1O88704 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Hcn1O88704 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.11■□□□□ 0.97
Hcn1O88704 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn1O88704 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn1O88704 Gm9806-201ENSMUST00000051080 552 ntBASIC21.1■□□□□ 0.97
Hcn1O88704 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn1O88704 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hcn1O88704 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hcn1O88704 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hcn1O88704 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hcn1O88704 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hcn1O88704 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.08■□□□□ 0.97
Hcn1O88704 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hcn1O88704 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hcn1O88704 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hcn1O88704 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.07■□□□□ 0.96
Hcn1O88704 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hcn1O88704 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hcn1O88704 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Hcn1O88704 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hcn1O88704 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hcn1O88704 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hcn1O88704 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Hcn1O88704 Gm11687-201ENSMUST00000118911 886 ntBASIC21.05■□□□□ 0.96
Hcn1O88704 Gm16437-201ENSMUST00000025669 507 ntBASIC21.05■□□□□ 0.96
Hcn1O88704 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hcn1O88704 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hcn1O88704 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hcn1O88704 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Hcn1O88704 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hcn1O88704 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.04■□□□□ 0.96
Hcn1O88704 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Hcn1O88704 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.03■□□□□ 0.96
Hcn1O88704 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hcn1O88704 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hcn1O88704 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hcn1O88704 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.02■□□□□ 0.96
Hcn1O88704 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hcn1O88704 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.02■□□□□ 0.96
Hcn1O88704 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms