Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr3O88410 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Cxcr3O88410 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cxcr3O88410 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.4■■□□□ 1.18
Cxcr3O88410 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Cxcr3O88410 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cxcr3O88410 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cxcr3O88410 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Cxcr3O88410 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.39■■□□□ 1.17
Cxcr3O88410 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.38■■□□□ 1.17
Cxcr3O88410 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cxcr3O88410 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cxcr3O88410 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cxcr3O88410 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr3O88410 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr3O88410 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr3O88410 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr3O88410 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr3O88410 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr3O88410 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr3O88410 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr3O88410 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr3O88410 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr3O88410 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr3O88410 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr3O88410 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cxcr3O88410 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cxcr3O88410 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cxcr3O88410 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Cxcr3O88410 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Cxcr3O88410 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Cxcr3O88410 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.34■■□□□ 1.17
Cxcr3O88410 Gm14523-201ENSMUST00000117260 558 ntBASIC22.34■■□□□ 1.17
Cxcr3O88410 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cxcr3O88410 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cxcr3O88410 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cxcr3O88410 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Cxcr3O88410 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cxcr3O88410 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.33■■□□□ 1.17
Cxcr3O88410 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.32■■□□□ 1.16
Cxcr3O88410 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cxcr3O88410 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Cxcr3O88410 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cxcr3O88410 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cxcr3O88410 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.32■■□□□ 1.16
Cxcr3O88410 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Cxcr3O88410 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr3O88410 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.31■■□□□ 1.16
Cxcr3O88410 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr3O88410 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr3O88410 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr3O88410 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Cxcr3O88410 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.29■■□□□ 1.16
Cxcr3O88410 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cxcr3O88410 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cxcr3O88410 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cxcr3O88410 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cxcr3O88410 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.28■■□□□ 1.16
Cxcr3O88410 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cxcr3O88410 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.28■■□□□ 1.16
Cxcr3O88410 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cxcr3O88410 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Cxcr3O88410 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.27■■□□□ 1.16
Cxcr3O88410 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cxcr3O88410 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cxcr3O88410 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.27■■□□□ 1.16
Cxcr3O88410 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.27■■□□□ 1.16
Cxcr3O88410 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cxcr3O88410 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cxcr3O88410 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Cxcr3O88410 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.26■■□□□ 1.15
Cxcr3O88410 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.26■■□□□ 1.15
Cxcr3O88410 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cxcr3O88410 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cxcr3O88410 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.26■■□□□ 1.15
Cxcr3O88410 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.26■■□□□ 1.15
Cxcr3O88410 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.26■■□□□ 1.15
Cxcr3O88410 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cxcr3O88410 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr3O88410 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr3O88410 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr3O88410 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.25■■□□□ 1.15
Cxcr3O88410 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr3O88410 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Cxcr3O88410 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr3O88410 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cxcr3O88410 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Cxcr3O88410 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cxcr3O88410 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cxcr3O88410 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cxcr3O88410 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcr3O88410 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcr3O88410 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcr3O88410 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Cxcr3O88410 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cxcr3O88410 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Cxcr3O88410 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cxcr3O88410 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cxcr3O88410 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Cxcr3O88410 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms