Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10226O88253 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10226O88253 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10226O88253 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm10226O88253 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10226O88253 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10226O88253 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10226O88253 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gm10226O88253 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10226O88253 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10226O88253 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10226O88253 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10226O88253 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10226O88253 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm10226O88253 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10226O88253 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10226O88253 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.34■□□□□ 0.37
Gm10226O88253 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10226O88253 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10226O88253 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gm10226O88253 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm10226O88253 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm10226O88253 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm10226O88253 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.33■□□□□ 0.36
Gm10226O88253 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm10226O88253 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.33■□□□□ 0.36
Gm10226O88253 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10226O88253 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10226O88253 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm10226O88253 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm10226O88253 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10226O88253 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm10226O88253 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10226O88253 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10226O88253 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10226O88253 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10226O88253 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10226O88253 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10226O88253 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10226O88253 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gm10226O88253 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.28■□□□□ 0.36
Gm10226O88253 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gm10226O88253 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.28■□□□□ 0.36
Gm10226O88253 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10226O88253 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10226O88253 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10226O88253 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10226O88253 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.27■□□□□ 0.36
Gm10226O88253 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10226O88253 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10226O88253 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm10226O88253 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Gm10226O88253 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm10226O88253 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10226O88253 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10226O88253 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm10226O88253 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10226O88253 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10226O88253 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm10226O88253 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10226O88253 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm10226O88253 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10226O88253 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10226O88253 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm10226O88253 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.25■□□□□ 0.35
Gm10226O88253 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10226O88253 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gm10226O88253 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10226O88253 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10226O88253 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10226O88253 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm10226O88253 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10226O88253 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10226O88253 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm10226O88253 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10226O88253 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10226O88253 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10226O88253 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.22■□□□□ 0.35
Gm10226O88253 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10226O88253 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10226O88253 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Gm10226O88253 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10226O88253 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10226O88253 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10226O88253 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10226O88253 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm10226O88253 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10226O88253 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm10226O88253 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10226O88253 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10226O88253 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms