Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10139O88245 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gm10139O88245 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10139O88245 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10139O88245 AC164433.2-201ENSMUST00000226346 1701 ntBASIC13.61□□□□□ -0.23
Gm10139O88245 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gm10139O88245 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.61□□□□□ -0.23
Gm10139O88245 Gm4799-201ENSMUST00000095396 657 ntBASIC13.61□□□□□ -0.23
Gm10139O88245 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10139O88245 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10139O88245 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10139O88245 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gm10139O88245 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10139O88245 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10139O88245 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC13.6□□□□□ -0.23
Gm10139O88245 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.6□□□□□ -0.23
Gm10139O88245 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.6□□□□□ -0.23
Gm10139O88245 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC13.6□□□□□ -0.23
Gm10139O88245 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gm10139O88245 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC13.6□□□□□ -0.23
Gm10139O88245 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10139O88245 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Gm10139O88245 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10139O88245 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm10139O88245 AC153911.1-201ENSMUST00000220378 758 ntBASIC13.59□□□□□ -0.23
Gm10139O88245 Gm9812-201ENSMUST00000061934 968 ntBASIC13.59□□□□□ -0.23
Gm10139O88245 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10139O88245 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10139O88245 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm10139O88245 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm10139O88245 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10139O88245 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gm10139O88245 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Gm10139O88245 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10139O88245 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gm10139O88245 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10139O88245 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10139O88245 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10139O88245 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm10139O88245 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm10139O88245 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm10139O88245 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm10139O88245 AC122317.2-201ENSMUST00000218708 1248 ntBASIC13.57□□□□□ -0.24
Gm10139O88245 Gm28731-201ENSMUST00000185564 1569 ntBASIC13.57□□□□□ -0.24
Gm10139O88245 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Gm10139O88245 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Gm10139O88245 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC13.56□□□□□ -0.24
Gm10139O88245 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm10139O88245 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Gm10139O88245 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm10139O88245 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm10139O88245 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Gm10139O88245 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm10139O88245 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm10139O88245 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Gm10139O88245 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm10139O88245 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.55□□□□□ -0.24
Gm10139O88245 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm10139O88245 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm10139O88245 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm10139O88245 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.54□□□□□ -0.24
Gm10139O88245 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm10139O88245 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm10139O88245 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm10139O88245 Mir3960-201ENSMUST00000198213 73 ntBASIC13.54□□□□□ -0.24
Gm10139O88245 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.54□□□□□ -0.24
Gm10139O88245 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm10139O88245 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm10139O88245 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm10139O88245 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm10139O88245 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm10139O88245 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Gm10139O88245 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Gm10139O88245 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gm10139O88245 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Gm10139O88245 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.53□□□□□ -0.24
Gm10139O88245 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC13.53□□□□□ -0.24
Gm10139O88245 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm10139O88245 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm10139O88245 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm10139O88245 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gm10139O88245 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Gm10139O88245 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms