Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch2O35595 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch2O35595 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.92■■□□□ 1.26
Ptch2O35595 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.92■■□□□ 1.26
Ptch2O35595 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch2O35595 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch2O35595 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch2O35595 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.91■■□□□ 1.26
Ptch2O35595 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.91■■□□□ 1.26
Ptch2O35595 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch2O35595 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch2O35595 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch2O35595 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch2O35595 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.9■■□□□ 1.26
Ptch2O35595 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch2O35595 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch2O35595 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.89■■□□□ 1.25
Ptch2O35595 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.88■■□□□ 1.25
Ptch2O35595 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.88■■□□□ 1.25
Ptch2O35595 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Ptch2O35595 Gm22567-201ENSMUST00000175542 342 ntBASIC22.88■■□□□ 1.25
Ptch2O35595 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Ptch2O35595 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch2O35595 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch2O35595 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch2O35595 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch2O35595 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch2O35595 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch2O35595 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.85■■□□□ 1.25
Ptch2O35595 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch2O35595 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch2O35595 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.85■■□□□ 1.25
Ptch2O35595 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch2O35595 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch2O35595 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Ptch2O35595 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch2O35595 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch2O35595 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch2O35595 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch2O35595 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch2O35595 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Ptch2O35595 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Ptch2O35595 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ptch2O35595 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch2O35595 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch2O35595 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch2O35595 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.82■■□□□ 1.24
Ptch2O35595 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch2O35595 Gm43566-201ENSMUST00000196851 808 ntBASIC22.81■■□□□ 1.24
Ptch2O35595 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch2O35595 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch2O35595 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch2O35595 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch2O35595 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch2O35595 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch2O35595 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch2O35595 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch2O35595 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.8■■□□□ 1.24
Ptch2O35595 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.8■■□□□ 1.24
Ptch2O35595 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.8■■□□□ 1.24
Ptch2O35595 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.8■■□□□ 1.24
Ptch2O35595 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch2O35595 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.8■■□□□ 1.24
Ptch2O35595 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch2O35595 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Ptch2O35595 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch2O35595 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch2O35595 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.79■■□□□ 1.24
Ptch2O35595 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch2O35595 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch2O35595 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch2O35595 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
Ptch2O35595 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch2O35595 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Ptch2O35595 Gm15820-201ENSMUST00000201566 728 ntBASIC22.78■■□□□ 1.24
Ptch2O35595 Gm45444-201ENSMUST00000211394 898 ntBASIC22.78■■□□□ 1.24
Ptch2O35595 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Ptch2O35595 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Ptch2O35595 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Ptch2O35595 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch2O35595 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.76■■□□□ 1.23
Ptch2O35595 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch2O35595 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch2O35595 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch2O35595 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch2O35595 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch2O35595 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch2O35595 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Ptch2O35595 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch2O35595 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch2O35595 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch2O35595 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Ptch2O35595 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch2O35595 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.74■■□□□ 1.23
Ptch2O35595 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch2O35595 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.74■■□□□ 1.23
Ptch2O35595 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch2O35595 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.73■■□□□ 1.23
Ptch2O35595 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch2O35595 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms