Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.59■□□□□ 0.41
Efnb3O35393 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Efnb3O35393 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Efnb3O35393 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Efnb3O35393 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Efnb3O35393 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Efnb3O35393 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Efnb3O35393 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Efnb3O35393 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Efnb3O35393 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Efnb3O35393 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.57■□□□□ 0.4
Efnb3O35393 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Efnb3O35393 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.56■□□□□ 0.4
Efnb3O35393 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Efnb3O35393 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Efnb3O35393 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.55■□□□□ 0.4
Efnb3O35393 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Efnb3O35393 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.55■□□□□ 0.4
Efnb3O35393 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Efnb3O35393 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.55■□□□□ 0.4
Efnb3O35393 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Efnb3O35393 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.54■□□□□ 0.4
Efnb3O35393 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Efnb3O35393 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Efnb3O35393 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.53■□□□□ 0.4
Efnb3O35393 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Efnb3O35393 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Efnb3O35393 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Efnb3O35393 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Efnb3O35393 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Efnb3O35393 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.53■□□□□ 0.4
Efnb3O35393 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Efnb3O35393 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Efnb3O35393 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.52■□□□□ 0.4
Efnb3O35393 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Efnb3O35393 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Efnb3O35393 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Efnb3O35393 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Efnb3O35393 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Efnb3O35393 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Efnb3O35393 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Efnb3O35393 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Efnb3O35393 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Efnb3O35393 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Efnb3O35393 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Efnb3O35393 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Efnb3O35393 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.5■□□□□ 0.39
Efnb3O35393 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Efnb3O35393 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Efnb3O35393 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Efnb3O35393 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Efnb3O35393 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Efnb3O35393 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Efnb3O35393 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.49■□□□□ 0.39
Efnb3O35393 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Efnb3O35393 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Efnb3O35393 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Efnb3O35393 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.49■□□□□ 0.39
Efnb3O35393 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Efnb3O35393 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.49■□□□□ 0.39
Efnb3O35393 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.48■□□□□ 0.39
Efnb3O35393 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Efnb3O35393 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Efnb3O35393 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Efnb3O35393 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Efnb3O35393 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Efnb3O35393 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Efnb3O35393 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Efnb3O35393 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.47■□□□□ 0.39
Efnb3O35393 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Efnb3O35393 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Efnb3O35393 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Efnb3O35393 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Efnb3O35393 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Efnb3O35393 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Efnb3O35393 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Efnb3O35393 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Efnb3O35393 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Efnb3O35393 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Efnb3O35393 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Efnb3O35393 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Efnb3O35393 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Efnb3O35393 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Efnb3O35393 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Efnb3O35393 Gm37136-201ENSMUST00000194368 194 ntBASIC17.45■□□□□ 0.38
Efnb3O35393 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Efnb3O35393 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Efnb3O35393 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.44■□□□□ 0.38
Efnb3O35393 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Efnb3O35393 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Efnb3O35393 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Efnb3O35393 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Efnb3O35393 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Efnb3O35393 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Efnb3O35393 Nkain2-201ENSMUST00000092602 558 ntBASIC17.44■□□□□ 0.38
Efnb3O35393 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Efnb3O35393 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Efnb3O35393 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Efnb3O35393 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Efnb3O35393 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms