Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ndufb11O09111 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndufb11O09111 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndufb11O09111 Gm25262-201ENSMUST00000174934 133 ntBASIC18.02■□□□□ 0.48
Ndufb11O09111 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.02■□□□□ 0.48
Ndufb11O09111 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufb11O09111 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufb11O09111 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufb11O09111 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Ndufb11O09111 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufb11O09111 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufb11O09111 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ndufb11O09111 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18■□□□□ 0.47
Ndufb11O09111 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18■□□□□ 0.47
Ndufb11O09111 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufb11O09111 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufb11O09111 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufb11O09111 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufb11O09111 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.99■□□□□ 0.47
Ndufb11O09111 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufb11O09111 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufb11O09111 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufb11O09111 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.98■□□□□ 0.47
Ndufb11O09111 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufb11O09111 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ndufb11O09111 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufb11O09111 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.97■□□□□ 0.47
Ndufb11O09111 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufb11O09111 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufb11O09111 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufb11O09111 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufb11O09111 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufb11O09111 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufb11O09111 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufb11O09111 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ndufb11O09111 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufb11O09111 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufb11O09111 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufb11O09111 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufb11O09111 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufb11O09111 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufb11O09111 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufb11O09111 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufb11O09111 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.95■□□□□ 0.46
Ndufb11O09111 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndufb11O09111 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndufb11O09111 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.94■□□□□ 0.46
Ndufb11O09111 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.94■□□□□ 0.46
Ndufb11O09111 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ndufb11O09111 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ndufb11O09111 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufb11O09111 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufb11O09111 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ndufb11O09111 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ndufb11O09111 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufb11O09111 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufb11O09111 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndufb11O09111 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ndufb11O09111 Particl-201ENSMUST00000205370 1560 ntBASIC17.91■□□□□ 0.46
Ndufb11O09111 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndufb11O09111 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ndufb11O09111 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndufb11O09111 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.91■□□□□ 0.46
Ndufb11O09111 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufb11O09111 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufb11O09111 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufb11O09111 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufb11O09111 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufb11O09111 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ndufb11O09111 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ndufb11O09111 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndufb11O09111 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndufb11O09111 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndufb11O09111 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndufb11O09111 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.89■□□□□ 0.45
Ndufb11O09111 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndufb11O09111 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ndufb11O09111 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ndufb11O09111 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufb11O09111 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufb11O09111 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufb11O09111 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufb11O09111 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufb11O09111 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.88■□□□□ 0.45
Ndufb11O09111 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufb11O09111 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.88■□□□□ 0.45
Ndufb11O09111 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufb11O09111 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufb11O09111 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ndufb11O09111 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufb11O09111 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufb11O09111 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufb11O09111 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufb11O09111 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.86■□□□□ 0.45
Ndufb11O09111 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufb11O09111 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Ndufb11O09111 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ndufb11O09111 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ndufb11O09111 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufb11O09111 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms