Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Gm43566-201ENSMUST00000196851 808 ntBASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Gm28729A0A1B0GSW2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm28729A0A1B0GSW2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.09■■□□□ 1.13
Gm28729A0A1B0GSW2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Gm28729A0A1B0GSW2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm28729A0A1B0GSW2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm28729A0A1B0GSW2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Gm45444-201ENSMUST00000211394 898 ntBASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm28729A0A1B0GSW2 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.06■■□□□ 1.12
Gm28729A0A1B0GSW2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm28729A0A1B0GSW2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Gm15820-201ENSMUST00000201566 728 ntBASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Gm28729A0A1B0GSW2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Gm28729A0A1B0GSW2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm28729A0A1B0GSW2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm28729A0A1B0GSW2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.11
Gm28729A0A1B0GSW2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm28729A0A1B0GSW2 Gm7199-201ENSMUST00000118327 1485 ntBASIC22■■□□□ 1.11
Gm28729A0A1B0GSW2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22■■□□□ 1.11
Gm28729A0A1B0GSW2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Gm28729A0A1B0GSW2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28729A0A1B0GSW2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms