Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-4A0A0G2JG37 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-4A0A0G2JG37 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-4A0A0G2JG37 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-4A0A0G2JG37 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-4A0A0G2JG37 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trav9d-4A0A0G2JG37 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-4A0A0G2JG37 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-4A0A0G2JG37 Gm30023-201ENSMUST00000197970 889 ntBASIC15.24■□□□□ 0.03
Trav9d-4A0A0G2JG37 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav9d-4A0A0G2JG37 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav9d-4A0A0G2JG37 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-4A0A0G2JG37 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-4A0A0G2JG37 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-4A0A0G2JG37 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-4A0A0G2JG37 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-4A0A0G2JG37 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-4A0A0G2JG37 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-4A0A0G2JG37 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-4A0A0G2JG37 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-4A0A0G2JG37 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-4A0A0G2JG37 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-4A0A0G2JG37 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.21■□□□□ 0.03
Trav9d-4A0A0G2JG37 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav9d-4A0A0G2JG37 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9d-4A0A0G2JG37 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.21■□□□□ 0.02
Trav9d-4A0A0G2JG37 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-4A0A0G2JG37 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-4A0A0G2JG37 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-4A0A0G2JG37 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-4A0A0G2JG37 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-4A0A0G2JG37 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-4A0A0G2JG37 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-4A0A0G2JG37 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-4A0A0G2JG37 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-4A0A0G2JG37 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-4A0A0G2JG37 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav9d-4A0A0G2JG37 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-4A0A0G2JG37 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-4A0A0G2JG37 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-4A0A0G2JG37 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-4A0A0G2JG37 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-4A0A0G2JG37 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-4A0A0G2JG37 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav9d-4A0A0G2JG37 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-4A0A0G2JG37 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-4A0A0G2JG37 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav9d-4A0A0G2JG37 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-4A0A0G2JG37 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9d-4A0A0G2JG37 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9d-4A0A0G2JG37 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav9d-4A0A0G2JG37 Gm24970-201ENSMUST00000175582 82 ntBASIC15.15■□□□□ 0.02
Trav9d-4A0A0G2JG37 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9d-4A0A0G2JG37 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.15■□□□□ 0.02
Trav9d-4A0A0G2JG37 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav9d-4A0A0G2JG37 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Gm9397-201ENSMUST00000200125 605 ntBASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-4A0A0G2JG37 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav9d-4A0A0G2JG37 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-4A0A0G2JG37 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav9d-4A0A0G2JG37 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-4A0A0G2JG37 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-4A0A0G2JG37 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms