Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13n-4A0A0G2JG01 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13n-4A0A0G2JG01 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13n-4A0A0G2JG01 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13n-4A0A0G2JG01 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13n-4A0A0G2JG01 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav13n-4A0A0G2JG01 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13n-4A0A0G2JG01 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-4A0A0G2JG01 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trav13n-4A0A0G2JG01 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gm45364-201ENSMUST00000210883 159 ntBASIC17.89■□□□□ 0.45
Trav13n-4A0A0G2JG01 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13n-4A0A0G2JG01 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13n-4A0A0G2JG01 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13n-4A0A0G2JG01 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Trav13n-4A0A0G2JG01 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav13n-4A0A0G2JG01 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gm27502-201ENSMUST00000183495 199 ntBASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-4A0A0G2JG01 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gm37136-201ENSMUST00000194368 194 ntBASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13n-4A0A0G2JG01 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-4A0A0G2JG01 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Trav13n-4A0A0G2JG01 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-4A0A0G2JG01 Gm7332-201ENSMUST00000118351 454 ntBASIC17.84■□□□□ 0.45
Trav13n-4A0A0G2JG01 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-4A0A0G2JG01 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav13n-4A0A0G2JG01 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-4A0A0G2JG01 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-4A0A0G2JG01 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav13n-4A0A0G2JG01 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.83■□□□□ 0.44
Trav13n-4A0A0G2JG01 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13n-4A0A0G2JG01 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.83■□□□□ 0.44
Trav13n-4A0A0G2JG01 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13n-4A0A0G2JG01 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13n-4A0A0G2JG01 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav13n-4A0A0G2JG01 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav13n-4A0A0G2JG01 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13n-4A0A0G2JG01 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13n-4A0A0G2JG01 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav13n-4A0A0G2JG01 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.81■□□□□ 0.44
Trav13n-4A0A0G2JG01 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.81■□□□□ 0.44
Trav13n-4A0A0G2JG01 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13n-4A0A0G2JG01 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13n-4A0A0G2JG01 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms