Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-5A0A0G2JFX6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav7-5A0A0G2JFX6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav7-5A0A0G2JFX6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-5A0A0G2JFX6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-5A0A0G2JFX6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-5A0A0G2JFX6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.42■□□□□ 0.38
Trav7-5A0A0G2JFX6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-5A0A0G2JFX6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav7-5A0A0G2JFX6 Gm11175-201ENSMUST00000116172 543 ntBASIC17.41■□□□□ 0.38
Trav7-5A0A0G2JFX6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-5A0A0G2JFX6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-5A0A0G2JFX6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-5A0A0G2JFX6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Trav7-5A0A0G2JFX6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-5A0A0G2JFX6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-5A0A0G2JFX6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav7-5A0A0G2JFX6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-5A0A0G2JFX6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav7-5A0A0G2JFX6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav7-5A0A0G2JFX6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.39■□□□□ 0.38
Trav7-5A0A0G2JFX6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav7-5A0A0G2JFX6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-5A0A0G2JFX6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav7-5A0A0G2JFX6 Gm44428-201ENSMUST00000204474 874 ntBASIC17.39■□□□□ 0.37
Trav7-5A0A0G2JFX6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-5A0A0G2JFX6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-5A0A0G2JFX6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav7-5A0A0G2JFX6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-5A0A0G2JFX6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-5A0A0G2JFX6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-5A0A0G2JFX6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-5A0A0G2JFX6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-5A0A0G2JFX6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-5A0A0G2JFX6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-5A0A0G2JFX6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-5A0A0G2JFX6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.36■□□□□ 0.37
Trav7-5A0A0G2JFX6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav7-5A0A0G2JFX6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-5A0A0G2JFX6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-5A0A0G2JFX6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav7-5A0A0G2JFX6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-5A0A0G2JFX6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-5A0A0G2JFX6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-5A0A0G2JFX6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trav7-5A0A0G2JFX6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-5A0A0G2JFX6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-5A0A0G2JFX6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.34■□□□□ 0.37
Trav7-5A0A0G2JFX6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.34■□□□□ 0.37
Trav7-5A0A0G2JFX6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav7-5A0A0G2JFX6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-5A0A0G2JFX6 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.34■□□□□ 0.37
Trav7-5A0A0G2JFX6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-5A0A0G2JFX6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
Trav7-5A0A0G2JFX6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav7-5A0A0G2JFX6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7-5A0A0G2JFX6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav7-5A0A0G2JFX6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Trav7-5A0A0G2JFX6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7-5A0A0G2JFX6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.33■□□□□ 0.36
Trav7-5A0A0G2JFX6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trav7-5A0A0G2JFX6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7-5A0A0G2JFX6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7-5A0A0G2JFX6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav7-5A0A0G2JFX6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.31■□□□□ 0.36
Trav7-5A0A0G2JFX6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav7-5A0A0G2JFX6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav7-5A0A0G2JFX6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7-5A0A0G2JFX6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7-5A0A0G2JFX6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7-5A0A0G2JFX6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7-5A0A0G2JFX6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-5A0A0G2JFX6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav7-5A0A0G2JFX6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-5A0A0G2JFX6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-5A0A0G2JFX6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-5A0A0G2JFX6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-5A0A0G2JFX6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-5A0A0G2JFX6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms