Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv26A0A0B4J1P5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm44428-201ENSMUST00000204474 874 ntBASIC18.45■□□□□ 0.54
Trbv26A0A0B4J1P5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv26A0A0B4J1P5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trbv26A0A0B4J1P5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv26A0A0B4J1P5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv26A0A0B4J1P5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trbv26A0A0B4J1P5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.42■□□□□ 0.54
Trbv26A0A0B4J1P5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trbv26A0A0B4J1P5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv26A0A0B4J1P5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm27502-201ENSMUST00000183495 199 ntBASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv26A0A0B4J1P5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv26A0A0B4J1P5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv26A0A0B4J1P5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm12366-201ENSMUST00000121722 873 ntBASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm5786-201ENSMUST00000085368 882 ntBASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms