Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.72■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.69■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.67■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tcrg-V4A0A0B4J1J8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.64■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.61■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tcrg-V4A0A0B4J1J8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms