Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.3■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Nkain2-201ENSMUST00000092602 558 ntBASIC15.26■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-4-dv7A0A075B6C2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Gm37136-201ENSMUST00000194368 194 ntBASIC15.19■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms