Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Trav6d-5A0A075B6B9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6d-5A0A075B6B9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6d-5A0A075B6B9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.08■□□□□ 0.48
Trav6d-5A0A075B6B9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6d-5A0A075B6B9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6d-5A0A075B6B9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-5A0A075B6B9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-5A0A075B6B9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-5A0A075B6B9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav6d-5A0A075B6B9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-5A0A075B6B9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-5A0A075B6B9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav6d-5A0A075B6B9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.06■□□□□ 0.48
Trav6d-5A0A075B6B9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-5A0A075B6B9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav6d-5A0A075B6B9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-5A0A075B6B9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-5A0A075B6B9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.05■□□□□ 0.48
Trav6d-5A0A075B6B9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-5A0A075B6B9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Trav6d-5A0A075B6B9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-5A0A075B6B9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav6d-5A0A075B6B9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-5A0A075B6B9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-5A0A075B6B9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trav6d-5A0A075B6B9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6d-5A0A075B6B9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6d-5A0A075B6B9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-5A0A075B6B9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-5A0A075B6B9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav6d-5A0A075B6B9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.03■□□□□ 0.48
Trav6d-5A0A075B6B9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav6d-5A0A075B6B9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-5A0A075B6B9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-5A0A075B6B9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-5A0A075B6B9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-5A0A075B6B9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-5A0A075B6B9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.01■□□□□ 0.47
Trav6d-5A0A075B6B9 Gm37136-201ENSMUST00000194368 194 ntBASIC18■□□□□ 0.47
Trav6d-5A0A075B6B9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-5A0A075B6B9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trav6d-5A0A075B6B9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-5A0A075B6B9 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.98■□□□□ 0.47
Trav6d-5A0A075B6B9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-5A0A075B6B9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-5A0A075B6B9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-5A0A075B6B9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6d-5A0A075B6B9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-5A0A075B6B9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-5A0A075B6B9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-5A0A075B6B9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-5A0A075B6B9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-5A0A075B6B9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav6d-5A0A075B6B9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-5A0A075B6B9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-5A0A075B6B9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
Trav6d-5A0A075B6B9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-5A0A075B6B9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-5A0A075B6B9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-5A0A075B6B9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-5A0A075B6B9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-5A0A075B6B9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trav6d-5A0A075B6B9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-5A0A075B6B9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-5A0A075B6B9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-5A0A075B6B9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Trav6d-5A0A075B6B9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-5A0A075B6B9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-5A0A075B6B9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-5A0A075B6B9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav6d-5A0A075B6B9 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.92■□□□□ 0.46
Trav6d-5A0A075B6B9 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-5A0A075B6B9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-5A0A075B6B9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms