Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4d-3A0A075B625 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4d-3A0A075B625 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav4d-3A0A075B625 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4d-3A0A075B625 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trav4d-3A0A075B625 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4d-3A0A075B625 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav4d-3A0A075B625 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.22■□□□□ 0.03
Trav4d-3A0A075B625 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4d-3A0A075B625 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav4d-3A0A075B625 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4d-3A0A075B625 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4d-3A0A075B625 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4d-3A0A075B625 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4d-3A0A075B625 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav4d-3A0A075B625 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4d-3A0A075B625 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav4d-3A0A075B625 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav4d-3A0A075B625 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav4d-3A0A075B625 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4d-3A0A075B625 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4d-3A0A075B625 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav4d-3A0A075B625 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4d-3A0A075B625 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4d-3A0A075B625 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4d-3A0A075B625 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Trav4d-3A0A075B625 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4d-3A0A075B625 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav4d-3A0A075B625 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4d-3A0A075B625 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav4d-3A0A075B625 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4d-3A0A075B625 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav4d-3A0A075B625 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4d-3A0A075B625 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4d-3A0A075B625 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4d-3A0A075B625 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4d-3A0A075B625 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4d-3A0A075B625 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trav4d-3A0A075B625 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4d-3A0A075B625 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4d-3A0A075B625 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4d-3A0A075B625 Gm26115-201ENSMUST00000175605 87 ntBASIC15.17■□□□□ 0.02
Trav4d-3A0A075B625 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.17■□□□□ 0.02
Trav4d-3A0A075B625 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4d-3A0A075B625 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4d-3A0A075B625 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4d-3A0A075B625 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4d-3A0A075B625 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4d-3A0A075B625 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav4d-3A0A075B625 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4d-3A0A075B625 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4d-3A0A075B625 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav4d-3A0A075B625 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4d-3A0A075B625 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trav4d-3A0A075B625 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4d-3A0A075B625 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4d-3A0A075B625 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav4d-3A0A075B625 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4d-3A0A075B625 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav4d-3A0A075B625 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4d-3A0A075B625 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4d-3A0A075B625 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4d-3A0A075B625 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4d-3A0A075B625 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4d-3A0A075B625 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4d-3A0A075B625 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4d-3A0A075B625 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4d-3A0A075B625 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4d-3A0A075B625 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4d-3A0A075B625 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav4d-3A0A075B625 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4d-3A0A075B625 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav4d-3A0A075B625 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4d-3A0A075B625 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4d-3A0A075B625 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav4d-3A0A075B625 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4d-3A0A075B625 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms