Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk1bQ9Z2C6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Gm15165-201ENSMUST00000118140 502 ntBASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Gm43767-201ENSMUST00000198933 381 ntBASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Upk1bQ9Z2C6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Gm25016-201ENSMUST00000158399 131 ntBASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.8□□□□□ -0.2
Upk1bQ9Z2C6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk1bQ9Z2C6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms