Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nek4Q9Z1J2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Gm10060-201ENSMUST00000212002 111 ntBASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek4Q9Z1J2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nek4Q9Z1J2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Gm23547-201ENSMUST00000158210 271 ntBASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Nek4Q9Z1J2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nek4Q9Z1J2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nek4Q9Z1J2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nek4Q9Z1J2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nek4Q9Z1J2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nek4Q9Z1J2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms