Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Gm12008-201ENSMUST00000117791 755 ntBASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col13a1Q9R1N9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Gm13453-201ENSMUST00000118708 357 ntBASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Gm14928-201ENSMUST00000120198 477 ntBASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.67□□□□□ -0.38
Col13a1Q9R1N9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms