Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh17Q9R100 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdh17Q9R100 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.51□□□□□ -0.09
Cdh17Q9R100 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Gm45167-201ENSMUST00000208007 322 ntBASIC14.51□□□□□ -0.09
Cdh17Q9R100 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh17Q9R100 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.5□□□□□ -0.09
Cdh17Q9R100 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Gm18246-201ENSMUST00000221023 728 ntBASIC14.5□□□□□ -0.09
Cdh17Q9R100 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh17Q9R100 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.49□□□□□ -0.09
Cdh17Q9R100 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh17Q9R100 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdh17Q9R100 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Cdh17Q9R100 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh17Q9R100 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdh17Q9R100 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms