Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Gm10052-201ENSMUST00000168019 960 ntBASIC12.63□□□□□ -0.39
Six6Q9QZ28 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Gm7729-201ENSMUST00000050143 801 ntBASIC12.63□□□□□ -0.39
Six6Q9QZ28 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Six6Q9QZ28 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six6Q9QZ28 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Gm44430-201ENSMUST00000203376 995 ntBASIC12.62□□□□□ -0.39
Six6Q9QZ28 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.62□□□□□ -0.39
Six6Q9QZ28 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Odf3b-204ENSMUST00000227834 930 ntBASIC12.61□□□□□ -0.39
Six6Q9QZ28 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.61□□□□□ -0.39
Six6Q9QZ28 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms