Protein–RNA interactions for Protein: Q9JMB8

Cntn6, Contactin-6, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn6Q9JMB8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cntn6Q9JMB8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.14■□□□□ 0.18
Cntn6Q9JMB8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn6Q9JMB8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Gm27622-201ENSMUST00000183779 60 ntBASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cntn6Q9JMB8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Gm13223-201ENSMUST00000118609 747 ntBASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Gm9719-201ENSMUST00000162765 543 ntBASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Gm27306-201ENSMUST00000183970 107 ntBASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Efs-202ENSMUST00000227037 2540 ntBASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cntn6Q9JMB8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.11■□□□□ 0.17
Cntn6Q9JMB8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms