Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl28Q9JIL2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Gm13418-201ENSMUST00000119097 944 ntBASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl28Q9JIL2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Ccl28Q9JIL2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Ccl28Q9JIL2 Gm43347-201ENSMUST00000200226 580 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms