Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Gm9013-201ENSMUST00000132939 882 ntBASIC17.1■□□□□ 0.33
Ush1cQ9ES64 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1cQ9ES64 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Gm11355-201ENSMUST00000121120 306 ntBASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1cQ9ES64 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ush1cQ9ES64 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1cQ9ES64 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1cQ9ES64 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1cQ9ES64 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1cQ9ES64 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Gm37722-201ENSMUST00000193757 208 ntBASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Gm10819-201ENSMUST00000099988 561 ntBASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Matn2-206ENSMUST00000228570 2798 ntBASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1cQ9ES64 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms