Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Syt7-204ENSMUST00000223586 1344 ntBASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Gm24543-201ENSMUST00000103867 82 ntBASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Gm43438-201ENSMUST00000198133 379 ntBASIC14.53□□□□□ -0.08
Rrp8Q9DB85 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rrp8Q9DB85 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rrp8Q9DB85 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rrp8Q9DB85 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.52□□□□□ -0.08
Rrp8Q9DB85 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rrp8Q9DB85 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.52□□□□□ -0.08
Rrp8Q9DB85 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rrp8Q9DB85 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rrp8Q9DB85 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rrp8Q9DB85 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Gm9719-201ENSMUST00000162765 543 ntBASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Gm7775-201ENSMUST00000218871 853 ntBASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.52□□□□□ -0.09
Rrp8Q9DB85 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.51□□□□□ -0.09
Rrp8Q9DB85 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms