Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Gm27430-201ENSMUST00000184585 107 ntBASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Gm44333-201ENSMUST00000197168 107 ntBASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph3bQ9DA80 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Gm25287-201ENSMUST00000103846 110 ntBASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Gm22918-201ENSMUST00000103855 110 ntBASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Gm14057-201ENSMUST00000120631 482 ntBASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Gm18737-201ENSMUST00000173594 937 ntBASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph3bQ9DA80 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Gm15483-201ENSMUST00000120338 456 ntBASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph3bQ9DA80 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Celf4-206ENSMUST00000224553 1729 ntBASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Gm38225-201ENSMUST00000194001 393 ntBASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Gm5779-201ENSMUST00000218467 910 ntBASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rsph3bQ9DA80 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms