Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.12□□□□□ -0.15
Upk1aQ9D132 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk1aQ9D132 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.11□□□□□ -0.15
Upk1aQ9D132 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Upk1aQ9D132 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.11□□□□□ -0.15
Upk1aQ9D132 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk1aQ9D132 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk1aQ9D132 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms