Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssu72Q9CY97 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Ssu72Q9CY97 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssu72Q9CY97 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.77□□□□□ -0.05
Ssu72Q9CY97 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.76□□□□□ -0.05
Ssu72Q9CY97 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Gm6296-201ENSMUST00000222599 943 ntBASIC14.76□□□□□ -0.05
Ssu72Q9CY97 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssu72Q9CY97 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Gm18489-201ENSMUST00000172565 551 ntBASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Gm23634-201ENSMUST00000175071 91 ntBASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Mir6982-201ENSMUST00000184354 68 ntBASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms