Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm9396-201ENSMUST00000076703 567 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Gm4984-201ENSMUST00000115987 360 ntBASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Gm19220-201ENSMUST00000222682 803 ntBASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cldnd1Q9CQX5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cldnd1Q9CQX5 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Gm5035-201ENSMUST00000215581 927 ntBASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.13■□□□□ 0.01
Cldnd1Q9CQX5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms