Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Gm10566-201ENSMUST00000086739 996 ntBASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
RTRAFQ9CQE8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Gm26039-201ENSMUST00000158152 144 ntBASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Gm21814-202ENSMUST00000203277 873 ntBASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTRAFQ9CQE8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.1□□□□□ -0.47
RTRAFQ9CQE8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms