Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39lQ9CQD0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Gm43353-201ENSMUST00000199224 1295 ntBASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Gm7370-201ENSMUST00000219471 767 ntBASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Gm10602-201ENSMUST00000098239 609 ntBASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Gm43570-201ENSMUST00000199951 3688 ntBASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rpl39lQ9CQD0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Mir1199-201ENSMUST00000117015 119 ntBASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Gm18284-201ENSMUST00000172604 624 ntBASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Gm3272-201ENSMUST00000181181 1229 ntBASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Gm10566-201ENSMUST00000086739 996 ntBASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Gm37844-201ENSMUST00000192473 4097 ntBASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Gm44645-201ENSMUST00000205492 1653 ntBASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rpl39lQ9CQD0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms