Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TpbpbQ9CQC0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TpbpbQ9CQC0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TpbpbQ9CQC0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.29□□□□□ -0.28
TpbpbQ9CQC0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Gm44454-201ENSMUST00000198541 138 ntBASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TpbpbQ9CQC0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Celf4-206ENSMUST00000224553 1729 ntBASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TpbpbQ9CQC0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.27□□□□□ -0.29
TpbpbQ9CQC0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.27□□□□□ -0.29
TpbpbQ9CQC0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.27□□□□□ -0.29
TpbpbQ9CQC0 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.27□□□□□ -0.29
TpbpbQ9CQC0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms