Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.21□□□□□ -0.45
Prpf8Q99PV0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf8Q99PV0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Gm8410-201ENSMUST00000117225 605 ntBASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf8Q99PV0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Gm24158-201ENSMUST00000175263 71 ntBASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf8Q99PV0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Gm28630-201ENSMUST00000187806 498 ntBASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Gm18049-201ENSMUST00000208909 581 ntBASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.19□□□□□ -0.46
Prpf8Q99PV0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms