Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Gm18062-201ENSMUST00000208020 547 ntBASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Gm18055-201ENSMUST00000208254 547 ntBASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx6-1Q99MA9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Gm4875-201ENSMUST00000118257 786 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Gm14042-201ENSMUST00000120139 833 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Mir7085-201ENSMUST00000184353 66 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-1Q99MA9 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms