Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3b3Q921M3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.8■□□□□ 0.44
Sf3b3Q921M3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3b3Q921M3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Gm14928-201ENSMUST00000120198 477 ntBASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.79■□□□□ 0.44
Sf3b3Q921M3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sf3b3Q921M3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Gm14042-201ENSMUST00000120139 833 ntBASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Gm9522-201ENSMUST00000182394 926 ntBASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Gm42612-201ENSMUST00000197986 623 ntBASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Gm43170-201ENSMUST00000199827 612 ntBASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b3Q921M3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Gm28631-201ENSMUST00000190740 334 ntBASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 AA619741-201ENSMUST00000195095 646 ntBASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Mir125a-201ENSMUST00000083545 68 ntBASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b3Q921M3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3b3Q921M3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Sf3b3Q921M3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3b3Q921M3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3b3Q921M3 BC001981-202ENSMUST00000191393 1545 ntBASIC17.77■□□□□ 0.43
Sf3b3Q921M3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3b3Q921M3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sf3b3Q921M3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.77■□□□□ 0.43
Sf3b3Q921M3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b3Q921M3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b3Q921M3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms