Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Gm24158-201ENSMUST00000175263 71 ntBASIC17.19■□□□□ 0.34
Smc1bQ920F6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc1bQ920F6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smc1bQ920F6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.19■□□□□ 0.34
Smc1bQ920F6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.18■□□□□ 0.34
Smc1bQ920F6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.18■□□□□ 0.34
Smc1bQ920F6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.17■□□□□ 0.34
Smc1bQ920F6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.17■□□□□ 0.34
Smc1bQ920F6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Gm43767-201ENSMUST00000198933 381 ntBASIC17.17■□□□□ 0.34
Smc1bQ920F6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.17■□□□□ 0.34
Smc1bQ920F6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smc1bQ920F6 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.17■□□□□ 0.34
Smc1bQ920F6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Gm18057-201ENSMUST00000208220 503 ntBASIC17.16■□□□□ 0.34
Smc1bQ920F6 Gm18246-201ENSMUST00000221023 728 ntBASIC17.16■□□□□ 0.34
Smc1bQ920F6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms