Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Pcdha2Q91Y17 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pcdha2Q91Y17 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha2Q91Y17 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Pcdha2Q91Y17 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha2Q91Y17 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha2Q91Y17 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Gm9726-201ENSMUST00000180321 678 ntBASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Olfr286-202ENSMUST00000205305 969 ntBASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha2Q91Y17 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Gm5479-201ENSMUST00000160578 435 ntBASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha2Q91Y17 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Gm2810-201ENSMUST00000118681 990 ntBASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Mir6990-201ENSMUST00000183724 91 ntBASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Gm44335-201ENSMUST00000196879 141 ntBASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Gm44297-201ENSMUST00000198304 141 ntBASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Gm44346-201ENSMUST00000198851 141 ntBASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha2Q91Y17 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha2Q91Y17 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Pcdha2Q91Y17 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdha2Q91Y17 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms