Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb22Q91XZ8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb22Q91XZ8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdhb22Q91XZ8 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.33■□□□□ 0.37
Pcdhb22Q91XZ8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb22Q91XZ8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb22Q91XZ8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb22Q91XZ8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb22Q91XZ8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb22Q91XZ8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Gm9726-201ENSMUST00000180321 678 ntBASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms