Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Mir5131-201ENSMUST00000175426 93 ntBASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Gm18246-201ENSMUST00000221023 728 ntBASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb8Q91XZ2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Gm18195-201ENSMUST00000207604 706 ntBASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb8Q91XZ2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms