Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gm27301-201ENSMUST00000184012 127 ntBASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gm10154-201ENSMUST00000084445 354 ntBASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb11Q91UZ8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Gm9385-201ENSMUST00000117563 472 ntBASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb11Q91UZ8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb11Q91UZ8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms