Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh18Q8VHR0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh18Q8VHR0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh18Q8VHR0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh18Q8VHR0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh18Q8VHR0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh18Q8VHR0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh18Q8VHR0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm8825-201ENSMUST00000182565 998 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm4518-201ENSMUST00000182638 718 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh18Q8VHR0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh18Q8VHR0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Gm9172-201ENSMUST00000212092 954 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms