Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Gm6222-201ENSMUST00000120787 396 ntBASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lmcd1Q8VEE1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lmcd1Q8VEE1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Gm13392-201ENSMUST00000117708 150 ntBASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Gm42693-201ENSMUST00000196779 631 ntBASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.77■□□□□ 0.12
Lmcd1Q8VEE1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lmcd1Q8VEE1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lmcd1Q8VEE1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lmcd1Q8VEE1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lmcd1Q8VEE1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lmcd1Q8VEE1 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.77■□□□□ 0.11
Lmcd1Q8VEE1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lmcd1Q8VEE1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.77■□□□□ 0.11
Lmcd1Q8VEE1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms