Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Gm15165-201ENSMUST00000118140 502 ntBASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Gm43767-201ENSMUST00000198933 381 ntBASIC12.15□□□□□ -0.46
Nup35Q8R4R6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup35Q8R4R6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup35Q8R4R6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Nup35Q8R4R6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nup35Q8R4R6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup35Q8R4R6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Nup35Q8R4R6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Gm25016-201ENSMUST00000158399 131 ntBASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms