Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Gm12008-201ENSMUST00000117791 755 ntBASIC14.05□□□□□ -0.16
Clrn1Q8K445 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.05□□□□□ -0.16
Clrn1Q8K445 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.05□□□□□ -0.16
Clrn1Q8K445 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.05□□□□□ -0.16
Clrn1Q8K445 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Gm13597-201ENSMUST00000121239 375 ntBASIC14.04□□□□□ -0.16
Clrn1Q8K445 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clrn1Q8K445 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.04□□□□□ -0.16
Clrn1Q8K445 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Efs-202ENSMUST00000227037 2540 ntBASIC14.04□□□□□ -0.16
Clrn1Q8K445 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clrn1Q8K445 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.04□□□□□ -0.16
Clrn1Q8K445 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.04□□□□□ -0.16
Clrn1Q8K445 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Clrn1Q8K445 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Gm12260-201ENSMUST00000122447 411 ntBASIC14.03□□□□□ -0.16
Clrn1Q8K445 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clrn1Q8K445 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Clrn1Q8K445 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.02□□□□□ -0.17
Clrn1Q8K445 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms