Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Gm45167-201ENSMUST00000208007 322 ntBASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 AV026068-213ENSMUST00000223675 1171 ntBASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Gm7153-201ENSMUST00000117092 455 ntBASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Gm18246-201ENSMUST00000221023 728 ntBASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cchcr1Q8K2I2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Carlr-201ENSMUST00000181515 2574 ntBASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Gm12008-201ENSMUST00000117791 755 ntBASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Gm17971-201ENSMUST00000190239 806 ntBASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Gm10060-201ENSMUST00000212002 111 ntBASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cchcr1Q8K2I2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cchcr1Q8K2I2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cchcr1Q8K2I2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cchcr1Q8K2I2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cchcr1Q8K2I2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cchcr1Q8K2I2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cchcr1Q8K2I2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cchcr1Q8K2I2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cchcr1Q8K2I2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms