Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn1Q8K0T0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn1Q8K0T0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rtn1Q8K0T0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rtn1Q8K0T0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rtn1Q8K0T0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Rtn1Q8K0T0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Gm15427-201ENSMUST00000117288 531 ntBASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Gm17271-201ENSMUST00000165535 355 ntBASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn1Q8K0T0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Gm4995-201ENSMUST00000117247 432 ntBASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Gm11434-201ENSMUST00000122379 629 ntBASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms