Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Gm13464-201ENSMUST00000119418 935 ntBASIC16.76■□□□□ 0.27
Syne4Q8CII8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Gm28760-201ENSMUST00000185995 736 ntBASIC16.76■□□□□ 0.27
Syne4Q8CII8 Gm18062-201ENSMUST00000208020 547 ntBASIC16.76■□□□□ 0.27
Syne4Q8CII8 Gm18055-201ENSMUST00000208254 547 ntBASIC16.76■□□□□ 0.27
Syne4Q8CII8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Gm9797-201ENSMUST00000052902 613 ntBASIC16.76■□□□□ 0.27
Syne4Q8CII8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Syne4Q8CII8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Syne4Q8CII8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.75■□□□□ 0.27
Syne4Q8CII8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.75■□□□□ 0.27
Syne4Q8CII8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Gm13829-201ENSMUST00000119600 138 ntBASIC16.75■□□□□ 0.27
Syne4Q8CII8 Gm11918-201ENSMUST00000121660 179 ntBASIC16.75■□□□□ 0.27
Syne4Q8CII8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Mir7085-201ENSMUST00000184353 66 ntBASIC16.75■□□□□ 0.27
Syne4Q8CII8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Syne4Q8CII8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Gm21854-201ENSMUST00000179901 471 ntBASIC16.74■□□□□ 0.27
Syne4Q8CII8 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.74■□□□□ 0.27
Syne4Q8CII8 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.74■□□□□ 0.27
Syne4Q8CII8 Gm44719-201ENSMUST00000206404 149 ntBASIC16.74■□□□□ 0.27
Syne4Q8CII8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.74■□□□□ 0.27
Syne4Q8CII8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.73■□□□□ 0.27
Syne4Q8CII8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.73■□□□□ 0.27
Syne4Q8CII8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Gm15824-201ENSMUST00000119516 955 ntBASIC16.73■□□□□ 0.27
Syne4Q8CII8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Gm18624-201ENSMUST00000220966 658 ntBASIC16.73■□□□□ 0.27
Syne4Q8CII8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Syne4Q8CII8 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.73■□□□□ 0.27
Syne4Q8CII8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms